2V5L Oxidoreductase date Jul 06, 2007
title Structures Of The Open And Closed State Of Trypanosomal Triosephosphate Isomerase: As Observed In A New Crystal For Implications For The Reaction Mechanism
authors M.E.M.Noble, J.P.Zeelen, R.K.Wierenga
compound source
Molecule: Triosephosphate Isomerase
Chain: A, B
Synonym: Triose-Phosphate Isomerase Glycosomsal, Tim
Ec: 5.3.1.1
Engineered: Yes
Organism_scientific: Trypanosoma Brucei Brucei
Organism_taxid: 5702
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 1 2 1
R_factor 0.158 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
94.600 48.200 130.700 90.00 100.60 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand SO4 enzyme Isomerase E.C.5.3.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructures of the "open" and "closed" state of trypanosomal triosephosphate isomerase, as observed in a new crystal form: implications for the reaction mechanism., Noble ME, Zeelen JP, Wierenga RK, Proteins. 1993 Aug;16(4):311-26. PMID:8356028
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (84 Kb) [Save to disk]
  • Biological Unit Coordinates (2v5l.pdb1.gz) 79 Kb
  • Biological Unit Coordinates (2v5l.pdb2.gz) 78 Kb
  • LPC: Ligand-Protein Contacts for 2V5L
  • CSU: Contacts of Structural Units for 2V5L
  • Likely Quarternary Molecular Structure file(s) for 2V5L
  • Retrieve 2V5L in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2V5L from S2C, [Save to disk]
  • View 2V5L in 3D
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  • Visual 3D analysis of 2V5L
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2V5L, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2v5l] [2v5l_B] [2v5l_A]
  • SWISS-PROT database: [P04789]
  • Domain organization of [TPIS_TRYBB] by SWISSPFAM
  • Other resources with information on 2V5L
  • Community annotation for 2V5L at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
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