2VNE	Lyase	date	Feb 04, 2008
title	The X-Ray Structure Of Norcoclaurine Synthase From Thalictrum Flavum
authors	A.Ilari, S.Franceschini, A.Boffi, A.Bonamore, A.Pasquo
compound		source
Molecule: S-Norcoclaurine Synthase Chain: A, B Fragment: Residues 16-210 Synonym: Norcoclaurine Synthase From Thalictrum Flavum Ec: 4.2.1.78 Engineered: Yes Mutation: Yes Other_details: The Protein Lacks The First 15 Residues And Is His-Tagged At The C-Terminus.		Organism_scientific: Thalictrum Flavum Organism_taxid: 150094 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21de3 Expression_system_plasmid: Pet22-B
symmetry	Space Group: P 31 2 1	R_factor 0.23939 R_Free 0.28482
crystal cell	length a length b length c angle alpha angle beta angle gamma 86.312 86.312 118.361 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.72 Å
ligand	MSE	enzyme	Lyase E.C.4.2.1.78 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural basis of enzymatic S-norcoclaurine biosynthesis., Ilari A, Franceschini S, Bonamore A, Arenghi F, Botta B, Macone A, Pasquo A, Bellucci L, Boffi A, J Biol Chem. 2008 Nov 12. PMID:19004827

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk] Biological Unit Coordinates (2vne.pdb1.gz) 103 Kb LPC: Ligand-Protein Contacts for 2VNE CSU: Contacts of Structural Units for 2VNE Likely Quarternary Molecular Structure file(s) for 2VNE Structure Factors (172 Kb) Retrieve 2VNE in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2VNE from S2C, [Save to disk] Re-refined 2vne structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2VNE in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2VNE

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2VNE, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2vne_A] [2vne_B] [2vne] SWISS-PROT database: [Q67A25] Domain organization of [NCS_THLFG] by SWISSPFAM

Other resources with information on 2VNE

Community annotation for 2VNE at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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