2VXE Transcription date Jul 03, 2008
title Solution Structure Of The Lsm Domain Of Drosophila Melanogaster Tral (Trailer Hitch)
authors F.Tritschler, M.Coles, V.Truffault
compound source
Molecule: Cg10686-Pa
Chain: A
Fragment: Lsm Domain, Residues 1-84
Synonym: Gh08269p, Tral-Trailer Hitch
Engineered: Yes
 Organism_scientific: Drosophila Melanogaster
Organism_common: Fruit Fly
Organism_taxid: 7227
Cell_line: S2 Cells
Expression_system: Escherichia Coli
Expression_system_taxid: 83333
Expression_system_strain: K12
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Petm60
methodSolution NMR
note 2VXE is a representative structure
Primary referenceA similar mode of interaction enables Trailer Hitch and EDC3 to associate with DCP1 and Me31B in distinct protein complexes., Tritschler F, Eulalio A, Helms S, Schmidt S, Coles M, Weichenrieder O, Izaurralde E, Truffault V, Mol Cell Biol. 2008 Sep 2. PMID:18765641
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (561 Kb) [Save to disk]
  • Biological Unit Coordinates (2vxe.pdb1.gz) 27 Kb
  • CSU: Contacts of Structural Units for 2VXE
  • Original NMR restraints for 2VXE from PDB
  • Retrieve 2VXE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2VXE from S2C, [Save to disk]
    • View 2VXE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2VXE
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2VXE, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2vxe] [2vxe_A]
  • SWISS-PROT database: [Q9VTZ0]
  • Domain organization of [Q9VTZ0_DROME] by SWISSPFAM
  • Domain found in 2VXE: [LSM14 ] by SMART
    • Other resources with information on 2VXE
  • Community annotation for 2VXE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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