2W8I Membrane Protein date Jan 16, 2009
title Crystal Structure Of Wza24-345.
authors G.Hagelueken, W.J.Ingledew, H.Huang, B.Petrovic-Stojanovska, C.W H.Elmkami, O.Schiemann, J.H.Naismith
compound source
Molecule: Putative Outer Membrane Lipoprotein Wza
Chain: A, B, C, D, E, F, G, H
Fragment: Periplasmic Domain, Residues 22-345
Synonym: Wza
Engineered: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Lmg194
Expression_system_plasmid: Pbadhistev
symmetry Space Group: P 21 21 2
R_factor 0.210 R_Free 0.231
crystal
cell
length a length b length c angle alpha angle beta angle gamma
140.084 140.202 165.226 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.00 Å
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Primary referencePELDOR Spectroscopy Distance Fingerprinting of the Octameric Outer-Membrane Protein Wza from Escherichia coli., Hagelueken G, Ingledew WJ, Huang H, Petrovic-Stojanovska B, Whitfield C, Elmkami H, Schiemann O, Naismith JH, Angew Chem Int Ed Engl. 2009 Mar 17;48(16):2904-2906. PMID:19294709
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (817 Kb) [Save to disk]
  • Biological Unit Coordinates (2w8i.pdb1.gz) 811 Kb
  • CSU: Contacts of Structural Units for 2W8I
  • Likely Quarternary Molecular Structure file(s) for 2W8I
  • Structure Factors (908 Kb)
  • Retrieve 2W8I in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2W8I from S2C, [Save to disk]
  • Re-refined 2w8i structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2W8I in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2W8I
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2W8I, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2w8i_D] [2w8i_H] [2w8i] [2w8i_A] [2w8i_B] [2w8i_E] [2w8i_F] [2w8i_C] [2w8i_G]
  • SWISS-PROT database: [Q9X4B7]
  • Domain organization of [Q9X4B7_ECOLX] by SWISSPFAM
  • Other resources with information on 2W8I
  • Community annotation for 2W8I at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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