2WQB Transferase date Aug 18, 2009
title Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor
authors C.Brassington, J.Breed, D.Buttar, M.Fitzek, C.Forder, L.Hassall, B.R.Hayter, C.D.Jones, R.W.A.Luke, E.Mccall, W.Mccoull, R.Norman D.Paterson, H.Mcmiken, S.Rowsell, J.A.Tucker
compound source
Molecule: Angiopoietin-1 Receptor
Chain: A
Fragment: Kinase Domain, Residues 802-1124
Synonym: Tyrosine-Protein Kinase Receptor Tie-2, Tie2 Kinas Tyrosine-Protein Kinase Receptor Tek, Tunica Interna Endoth Kinase, P140 Tek, Htie2;
Ec: 2.7.10.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
Expression_system_strain: Sf9
Expression_system_vector_type: Baculovirus
symmetry Space Group: C 2 2 21
R_factor 0.196 R_Free 0.259
crystal
cell
length a length b length c angle alpha angle beta angle gamma
80.164 108.791 101.573 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.95 Å
ligand QQ1 BindingDB enzyme Transferase E.C.2.7.10.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceNovel thienopyrimidine and thiazolopyrimidine kinase inhibitors with activity against Tie-2 in vitro and in vivo., Luke RW, Ballard P, Buttar D, Campbell L, Curwen J, Emery SC, Griffen AM, Hassall L, Hayter BR, Jones CD, McCoull W, Mellor M, Swain ML, Tucker JA, Bioorg Med Chem Lett. 2009 Oct 13. PMID:19854647
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk]
  • Biological Unit Coordinates (2wqb.pdb1.gz) 47 Kb
  • LPC: Ligand-Protein Contacts for 2WQB
  • CSU: Contacts of Structural Units for 2WQB
  • Structure Factors (142 Kb)
  • Retrieve 2WQB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2WQB from S2C, [Save to disk]
  • Re-refined 2wqb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2WQB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2WQB
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2WQB, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2wqb] [2wqb_A]
  • SWISS-PROT database: [Q02763]
  • Domain organization of [TIE2_HUMAN] by SWISSPFAM
  • Domain found in 2WQB: [TyrKc ] by SMART
  • Other resources with information on 2WQB
  • Community annotation for 2WQB at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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