3AEV	Translation Rna Binding Protein Rna	date	Feb 10, 2010
title	Crystal Structure Of Aeif2alpha-Adim2p-Rrna Complex From Py Horikoshii Ot3
authors	M.Tanokura, M.Z.Jia, K.Nagata
compound		source
Molecule: Translation Initiation Factor 2 Subunit Alpha Chain: A Synonym: Eif-2-Alpha, Aif2-Alpha Engineered: Yes		Organism_scientific: Pyrococcus Horikoshii Organism_taxid: 53953 Gene: Ph0961 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28a
Molecule: Putative Uncharacterized Protein Ph1566 Chain: B Synonym: Adim2p Engineered: Yes		Organism_scientific: Pyrococcus Horikoshii Organism_taxid: 53953 Gene: Ph1566 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28a
Molecule: Rna (5'-R(Gpgpapupcpapcpcpupcpc)-3') Chain: C Engineered: Yes		Synthetic: Yes
symmetry	Space Group: P 21 21 21	R_factor 0.212 R_Free 0.246
crystal cell	length a length b length c angle alpha angle beta angle gamma 86.998 93.600 116.704 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.80 Å
Gene Ontology	Chain Function Process Component A B
Primary reference	An Archaeal Dim2-Like Protein, aDim2p, Forms a Ternary Complex with a/eIF2alpha and the 3' End Fragment of 16S rRNA., Jia MZ, Horita S, Nagata K, Tanokura M, J Mol Biol. 2010 Apr 2. PMID:20363226

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (70 Kb) [Save to disk] Biological Unit Coordinates (3aev.pdb1.gz) 60 Kb CSU: Contacts of Structural Units for 3AEV Structure Factors (311 Kb) Retrieve 3AEV in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3AEV from S2C, [Save to disk] Re-refined 3aev structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3AEV in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3AEV

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3AEV, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3aev] [3aev_B] [3aev_C] [3aev_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 3AEV: [KH] [S1 ] by SMART

Other resources with information on 3AEV

Community annotation for 3AEV at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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