3D83	Transferase	date	May 22, 2008
title	Crystal Structure Of P38 Kinase In Complex With A Biphenyl A Inhibitor
authors	D.O.Somers
compound		source
Molecule: Mitogen-Activated Protein Kinase 14 Chain: A Synonym: Mitogen-Activated Protein Kinase P38 Alpha, Map Ki Alpha, Cytokine Suppressive Anti-Inflammatory Drug-Binding Csaid-Binding Protein, Csbp, Max-Interacting Protein 2, Map Mxi2, Sapk2a; Ec: 2.7.11.24 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_taxid: 9606 Gene: Mapk14, Csbp, Csbp1, Csbp2, Cspb1, Mxi2 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Brl Expression_system_vector_type: Plasmid Expression_system_plasmid: Prseta
symmetry	Space Group: P 21 21 21	R_factor 0.175 R_Free 0.218
crystal cell	length a length b length c angle alpha angle beta angle gamma 46.240 86.523 127.108 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand	CSO, GK6, GOL BindingDB	enzyme	Transferase E.C.2.7.11.24 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Biphenyl amide p38 kinase inhibitors 4: DFG-in and DFG-out binding modes., Angell RM, Angell TD, Bamborough P, Bamford MJ, Chung CW, Cockerill SG, Flack SS, Jones KL, Laine DI, Longstaff T, Ludbrook S, Pearson R, Smith KJ, Smee PA, Somers DO, Walker AL, Bioorg Med Chem Lett. 2008 Jun 12;. PMID:18602262

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (71 Kb) [Save to disk] Biological Unit Coordinates (3d83.pdb1.gz) 65 Kb LPC: Ligand-Protein Contacts for 3D83 CSU: Contacts of Structural Units for 3D83 Likely Quarternary Molecular Structure file(s) for 3D83 Structure Factors (254 Kb) Retrieve 3D83 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3D83 from S2C, [Save to disk] Re-refined 3d83 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3D83 in 3D

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Visual 3D analysis of 3D83

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3D83, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3d83] [3d83_A] SWISS-PROT database: [Q16539] Domain organization of [MK14_HUMAN] by SWISSPFAM Domain found in 3D83: [S_TKc ] by SMART

Other resources with information on 3D83

Community annotation for 3D83 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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