3OOY Crystal structure of human Transketolase (TKT) date
authors Krojer, T., Krysztofinska, E., Guo, K., Pilka, E., Kochan, G., Chaikuad, A., Vollmar, M., Delft, F.von., Bountra, C., Arrowsmith, C.H., Weigelt, J., Edwards, A., Kavanagh, K., Oppermann, U., SGC, Structural.Genomics.Consortium.
compound source
symmetry
R_factor
R_Free 0.23366
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.05
ligand ACT, CA, EDO, TDP, TPP enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (201 Kb) [Save to disk]
  • Biological Unit Coordinates (3ooy.pdb1.gz) 194 Kb
  • LPC: Ligand-Protein Contacts for 3OOY
  • CSU: Contacts of Structural Units for 3OOY
  • Structure Factors (911 Kb)
  • Retrieve 3OOY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3OOY from S2C, [Save to disk]
  • Re-refined 3ooy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3OOY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3OOY
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3OOY, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ooy] [3ooy_B] [3ooy_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3OOY: [Transket_pyr ] by SMART
    • Other resources with information on 3OOY
  • Community annotation for 3OOY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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