3RPF	Transferase	date	Apr 26, 2011
title	Protein-Protein Complex Of Subunit 1 And 2 Of Molybdopterin- Factor From Helicobacter Pylori 26695
authors	B.Nocek, A.Stein, N.Marshall, R.Jedrzejczak, G.Babnigg, A.Joachim Midwest Center For Structural Genomics (Mcsg)
compound		source
Molecule: Molybdopterin Synthase Catalytic Subunit Chain: A, B Synonym: Mpt Synthase Subunit 2, Molybdenum Cofactor Biosyn Protein E, Molybdopterin-Converting Factor Large Subunit, Molybdopterin-Converting Factor Subunit 2; Ec: 2.-.-.- Engineered: Yes		Organism_scientific: Helicobacter Pylori Organism_taxid: 85962 Strain: 26695 Gene: Moae, Hp_0800 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Molybdopterin Converting Factor, Subunit 1 (Moad) Chain: C, D Engineered: Yes		Organism_scientific: Helicobacter Pylori Organism_taxid: 85962 Strain: 26695 Gene: Hp_0801 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: F 2 2 2	R_factor 0.202 R_Free 0.242
crystal cell	length a length b length c angle alpha angle beta angle gamma 88.187 127.582 187.945 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand	EDO, MSE, SO4	enzyme	Transferase E.C.2 BRENDA
note	3RPF is a representative structure
Gene	HP ; HP
Gene Ontology	Chain Function Process Component A, B D, C

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (155 Kb) [Save to disk] Biological Unit Coordinates (3rpf.pdb1.gz) 138 Kb Biological Unit Coordinates (3rpf.pdb2.gz) 70 Kb Biological Unit Coordinates (3rpf.pdb3.gz) 147 Kb Biological Unit Coordinates (3rpf.pdb4.gz) 74 Kb LPC: Ligand-Protein Contacts for 3RPF CSU: Contacts of Structural Units for 3RPF Structure Factors (644 Kb) Retrieve 3RPF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3RPF from S2C, [Save to disk] Re-refined 3rpf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3RPF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3RPF

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3RPF, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3rpf] [3rpf_C] [3rpf_A] [3rpf_B] [3rpf_D] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3RPF

Community annotation for 3RPF at PDBWiki (http://pdbwiki.org)

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