4F4I Crystal structure of Thymidylate Kinase from Staphylococcus aureus in apo-form date
authors Filippova, E.V., Minasov, G., Shuvalova, L., Kiryukhina, O., Jedrzejczak, R., Babnigg, G., Rubin, E., Sacchettini, J., Joachimiak, A., Anderson, W.F., MCSG, Midwest.Center.for.Structural.Genomics., MTBI, Structures.of.Mtb.Proteins.Conferring.Susceptibility.to.Known.Mtb.Inhibitors.
compound source
symmetry
R_factor
R_Free 0.24162
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.45
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • thymidylate kinase activity


    • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (129 Kb) [Save to disk]
  • Biological Unit Coordinates (4f4i.pdb1.gz) 123 Kb
  • Biological Unit Coordinates (4f4i.pdb2.gz) 123 Kb
  • CSU: Contacts of Structural Units for 4F4I
  • Structure Factors (202 Kb)
  • Retrieve 4F4I in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4F4I from S2C, [Save to disk]
  • Re-refined 4f4i structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4F4I in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4F4I
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4F4I, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4f4i] [4f4i_B] [4f4i_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4F4I
  • Community annotation for 4F4I at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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