4OXC Crystal structure of XIAP BIR1 domain date
authors Milani, M., Cossu, F., Mastrangelo, E.
compound source
symmetry
R_factor
R_Free 0.251
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.90
ligand ZN enzyme
Primary referenceNF023 binding to XIAP-BIR1: Searching drugs for regulation of the NF-kappaB pathway., Cossu F, Milani M, Grassi S, Malvezzi F, Corti A, Bolognesi M, Mastrangelo E, Proteins. 2015 Jan 23. doi: 10.1002/prot.24766. PMID:25619915
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk]
  • Biological Unit Coordinates (4oxc.pdb1.gz) 14 Kb
  • Biological Unit Coordinates (4oxc.pdb2.gz) 14 Kb
  • Biological Unit Coordinates (4oxc.pdb3.gz) 14 Kb
  • Biological Unit Coordinates (4oxc.pdb4.gz) 13 Kb
  • LPC: Ligand-Protein Contacts for 4OXC
  • CSU: Contacts of Structural Units for 4OXC
  • Structure Factors (426 Kb)
  • Retrieve 4OXC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4OXC from S2C, [Save to disk]
  • Re-refined 4oxc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4OXC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4OXC
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4OXC, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4oxc_B] [4oxc_A] [4oxc_C] [4oxc_D] [4oxc]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4OXC: [BIR ] by SMART
    • Other resources with information on 4OXC
  • Community annotation for 4OXC at PDBWiki (http://pdbwiki.org)

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