5D41	Transferase Transferase Inhibitor	date	Aug 07, 2015
title	Egfr Kinase Domain In Complex With Mutant Selective Alloster Inhibitor
authors	C.H.Yun, E.Park, M.J.Eck
compound		source
Molecule: Epidermal Growth Factor Receptor Chain: A, B Synonym: Proto-Oncogene C-Erbb-1,Receptor Tyrosine-Protein Erbb-1; Ec: 2.7.10.1 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Egfr, Erbb, Erbb1, Her1 Expression_system: Spodoptera Frugiperda Expression_system_taxid: 7108 Expression_system_plasmid: Ptriex 1.1
symmetry	Space Group: C 1 2 1	R_factor 0.174 R_Free 0.207
crystal cell	length a length b length c angle alpha angle beta angle gamma 155.133 72.497 75.998 90.00 113.24 90.00
method	X-Ray Diffraction	resolution	2.31 Å
ligand	57N, ANP, MG	enzyme	Transferase E.C.2.7.10.1 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Overcoming EGFR(T790M) and EGFR(C797S) resistance with mutant-selective allosteric inhibitors., Jia Y, Yun CH, Park E, Ercan D, Manuia M, Juarez J, Xu C, Rhee K, Chen T, Zhang H, Palakurthi S, Jang J, Lelais G, DiDonato M, Bursulaya B, Michellys PY, Epple R, Marsilje TH, McNeill M, Lu W, Harris J, Bender S, Wong KK, Janne PA, Eck MJ, Nature. 2016 Jun 2;534(7605):129-32. doi: 10.1038/nature17960. Epub 2016 May 25. PMID:27251290

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (112 Kb) [Save to disk] Biological Unit Coordinates (5d41.pdb1.gz) 106 Kb LPC: Ligand-Protein Contacts for 5D41 CSU: Contacts of Structural Units for 5D41 Structure Factors (586 Kb) Retrieve 5D41 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5D41 from S2C, [Save to disk] Re-refined 5d41 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5D41 in 3D

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Visual 3D analysis of 5D41

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5d41] [5d41_B] [5d41_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 5D41: [TyrKc ] by SMART

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