5E1S Transferase date Sep 30, 2015
title The Crystal Structure Of Insr Tyrosine Kinase In Complex Wit Inhibitor Bi 885578
authors D.Kessler, S.Zahn, M.Sanderson, B.Wolkerstorfer
compound source
Molecule: Insulin Receptor
Chain: A
Synonym: Ir
Ec: 2.7.10.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Insr
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
symmetry Space Group: P 21 21 21
R_factor 0.213 R_Free 0.262
crystal
cell
length a length b length c angle alpha angle beta angle gamma
56.550 70.370 87.850 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.26 Å
ligand 5JA enzyme Transferase E.C.2.7.10.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceBI 885578, a novel IGF1R/INSR tyrosine kinase inhibitor with pharmacokinetic properties that dissociate anti-tumor efficacy and perturbation of glucose homeostasis., Sanderson MP, Apgar J, Garin-Chesa P, Hofmann MH, Kessler D, Quant J, Savchenko A, Schaaf O, Treu M, Tye H, Zahn SK, Zoephel A, Haaksma E, Adolf GR, Kraut N, Mol Cancer Ther. 2015 Oct 5. pii: molcanther.0539.2015. PMID:26438154
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (102 Kb) [Save to disk]
  • Biological Unit Coordinates (5e1s.pdb1.gz) 97 Kb
  • LPC: Ligand-Protein Contacts for 5E1S
  • CSU: Contacts of Structural Units for 5E1S
  • Structure Factors (414 Kb)
  • Retrieve 5E1S in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5E1S from S2C, [Save to disk]
  • Re-refined 5e1s structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5E1S in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5E1S
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5e1s] [5e1s_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5E1S: [TyrKc ] by SMART
  • Other resources with information on 5E1S
  • Community annotation for 5E1S at PDBWiki (http://pdbwiki.org)

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