5IJ8	Transferase Transferase Inhibitor	date	Mar 01, 2016
title	Structure Of The Primary Oncogenic Mutant Y641n Hsacprc2 In With A Pyridone Inhibitor
authors	K.S.Gajiwala, A.Brooun, Y.L.Deng, W.Liu
compound		source
Molecule: Enhancer Of Zeste Homolog 2 (Ezh2),Histone-Lysine Methyltransferase Ezh2; Chain: A, B Synonym: Enx-1,Enhancer Of Zeste Homolog 2,Lysine N-Methylt 6; Ec: 2.1.1.43 Engineered: Yes		Organism_scientific: Anolis Carolinensis, Homo Sapiens Organism_common: Green Anole, Human Organism_taxid: 28377, 9606 Gene: Ezh2, Ezh2, Kmt6 Expression_system: Spodoptera Frugiperda Expression_system_taxid: 7108
Molecule: Polycomb Protein Eed Chain: E, F Synonym: Heed,Wd Protein Associating With Integrin Cytoplas 1,Wait-1; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Eed Expression_system: Spodoptera Frugiperda Expression_system_taxid: 7108
Molecule: Polycomb Protein Suz12 Chain: S, T Synonym: Chromatin Precipitated E2f Target 9 Protein,Chet 9 Joined To Jazf1 Protein,Suppressor Of Zeste 12 Protein Homo Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Suz12, Chet9, Jjaz1, Kiaa0160 Expression_system: Spodoptera Frugiperda Expression_system_taxid: 7108
symmetry	Space Group: P 1 21 1	R_factor 0.188 R_Free 0.240
crystal cell	length a length b length c angle alpha angle beta angle gamma 71.331 115.133 153.939 90.00 103.35 90.00
method	X-Ray Diffraction	resolution	2.99 Å
ligand	6BN, ZN	enzyme	Transferase E.C.2.1.1.43 BRENDA
Gene Ontology	Chain Function Process Component A, B F, E
Primary reference	Polycomb repressive complex 2 structure with inhibitor reveals a mechanism of activation and drug resistance., Brooun A, Gajiwala KS, Deng YL, Liu W, Bolanos B, Bingham P, He YA, Diehl W, Grable N, Kung PP, Sutton S, Maegley KA, Yu X, Stewart AE, Nat Commun. 2016 Apr 28;7:11384. doi: 10.1038/ncomms11384. PMID:27122193

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (321 Kb) [Save to disk] Biological Unit Coordinates (5ij8.pdb1.gz) 159 Kb Biological Unit Coordinates (5ij8.pdb2.gz) 160 Kb LPC: Ligand-Protein Contacts for 5IJ8 CSU: Contacts of Structural Units for 5IJ8 Structure Factors (405 Kb) Retrieve 5IJ8 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5IJ8 from S2C, [Save to disk] Re-refined 5ij8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5IJ8 in 3D

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Visual 3D analysis of 5IJ8

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5ij8_F] [5ij8] [5ij8_E] [5ij8_T] [5ij8_S] [5ij8_A] [5ij8_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 5IJ8: [CXC] [SANT] [SET] [WD40 ] by SMART

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