5L7E	Signaling Protein	date	Jun 03, 2016
title	Mcr In Complex With Ligand
authors	K.Edman, A.Aagaard, S.Backstrom, Y.Xue
compound		source
Molecule: Mineralocorticoid Receptor Chain: A Synonym: Mr,Nuclear Receptor Subfamily 3 Group C Member 2 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Nr3c2, Mcr, Mlr Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008
Molecule: Ncoa1 Peptide Chain: B Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008
symmetry	Space Group: P 21 21 21	R_factor 0.180 R_Free 0.197
crystal cell	length a length b length c angle alpha angle beta angle gamma 48.620 77.830 78.650 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.86 Å
ligand	6Q0, EDO, MPD, NHE, SO4	enzyme
Primary reference	Structure-based drug design of mineralocorticoid receptor antagonists to explore oxosteroid receptor selectivity., Nordqvist A, O'Mahony G, Friden-Saxin M, Fredenwall M, Hogner A, Granberg KL, Aagaard A, Backstrom S, Gunnarsson A, Kaminski T, Xue Y, Dellsen A, Hansson E, Hansson P, Ivarsson I, Karlsson U, Bamberg K, Hermansson M, Georgsson J, Lindmark B, Edman K, ChemMedChem. 2016 Nov 29. doi: 10.1002/cmdc.201600529. PMID:27897427

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk] Biological Unit Coordinates (5l7e.pdb1.gz) 48 Kb LPC: Ligand-Protein Contacts for 5L7E CSU: Contacts of Structural Units for 5L7E Structure Factors (710 Kb) Retrieve 5L7E in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5L7E from S2C, [Save to disk] Re-refined 5l7e structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5L7E in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5L7E

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5l7e] [5l7e_B] [5l7e_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5L7E

Community annotation for 5L7E at PDBWiki (http://pdbwiki.org)

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