5PTI Hydrolase Inhibitor date Oct 05, 1984
title Structure Of Bovine Pancreatic Trypsin Inhibitor. Results Of Neutron And X-Ray Refinement Of Crystal Form II
authors A.Wlodawer, R.Huber
compound source
Molecule: Trypsin Inhibitor
Chain: A
Engineered: Yes
 Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
symmetry Space Group: P 21 21 21
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
74.100 23.400 28.900 90.00 90.00 90.00
method X-Ray Diffraction; Neutron Diffractionresolution 1.00 Å
ligand PO4, UNX enzyme
related structures by homologous chain: 1BPI, 1K6U
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of bovine pancreatic trypsin inhibitor. Results of joint neutron and X-ray refinement of crystal form II., Wlodawer A, Walter J, Huber R, Sjolin L, J Mol Biol 1984 Dec 5;180(2):301-29. PMID:6210373
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (27 Kb) [Save to disk]
  • Biological Unit Coordinates (5pti.pdb1.gz) 19 Kb
  • LPC: Ligand-Protein Contacts for 5PTI
  • CSU: Contacts of Structural Units for 5PTI
  • Likely Quarternary Molecular Structure file(s) for 5PTI
  • Structure Factors (226 Kb)
  • Retrieve 5PTI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5PTI from S2C, [Save to disk]
  • Re-refined 5pti structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5PTI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5PTI
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Conformational Epitope Prediction for 5PTI from the CEP Server.
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 5PTI, from MSDmotif at EBI
  • Genome occurence of 5PTI's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d5pti__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5pti_A] [5pti]
  • SWISS-PROT database: [P00974]
  • Domain organization of [BPT1_BOVIN] by SWISSPFAM
  • Domain found in 5PTI: [KU ] by SMART
    • Other resources with information on 5PTI
  • Community annotation for 5PTI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Domain movements in 5PTI from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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