5XBL	Hydrolase Rna	date	Mar 20, 2017
title	Structure Of Nuclease In Complex With Associated Protein
authors	D.Dong, M.Guo, S.Wang, Y.Zhu, Z.Huang
compound		source
Molecule: Crispr-Associated Endonuclease Cas9csn1 Chain: A Synonym: Spcas9,Spycas9 Ec: 3.1.-.- Engineered: Yes		Organism_scientific: Streptococcus Pyogenes Serotype M1 Organism_taxid: 301447 Gene: Cas9, Csn1, Spy_1046 Expression_system: Escherichia Coli K-12 Expression_system_taxid: 83333 Expression_system_strain: K-12
Molecule: Associated Protein Chain: D Engineered: Yes		Organism_scientific: Listeria Monocytogenes Organism_taxid: 1639 Expression_system: Escherichia Coli K-12 Expression_system_taxid: 83333 Expression_system_strain: K-12
Molecule: Rna (98-Mer) Chain: B Engineered: Yes		Synthetic: Yes Organism_scientific: Streptococcus Pyogenes Organism_taxid: 1314
symmetry	Space Group: P 1 21 1	R_factor 0.237 R_Free 0.277
crystal cell	length a length b length c angle alpha angle beta angle gamma 108.406 69.756 129.240 90.00 105.73 90.00
method	X-Ray Diffraction	resolution	3.05 Å
ligand		enzyme	Hydrolase E.C.3.1 BRENDA
Gene Ontology	Chain Function Process Component A nuclease activity endonuclease activity exonuclease activity 3'-5' exonuclease activity

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (263 Kb) [Save to disk] Biological Unit Coordinates (5xbl.pdb1.gz) 257 Kb CSU: Contacts of Structural Units for 5XBL Structure Factors (749 Kb) Retrieve 5XBL in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5XBL from S2C, [Save to disk] Re-refined 5xbl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5XBL in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5XBL

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5xbl_D] [5xbl_B] [5xbl_A] SWISS-PROT database: Domain organization of by SWISSPFAM

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Community annotation for 5XBL at PDBWiki (http://pdbwiki.org)

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