8G0G Toxin date Jan 31, 2023
title Crystal Structure Of Diphtheria Toxin H223qh257q Double Mut 4.5)
authors S.Lovell, M.M.Kashipathy, K.P.Battaile, A.S.Ladokhin
compound source
Molecule: Diphtheria Toxin
Chain: A, B
Engineered: Yes
Mutation: Yes
Organism_scientific: Corynebacterium Diphtheriae
Organism_taxid: 1717
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl23delyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
symmetry Space Group: P 1
R_factor 0.190 R_Free 0.239
crystal
cell
length a length b length c angle alpha angle beta angle gamma
69.360 69.399 69.670 64.51 76.51 81.19
method X-Ray Diffractionresolution 2.10 Å
ligand APU enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (165 Kb) [Save to disk]
  • Biological Unit Coordinates (8g0g.pdb1.gz) 159 Kb
  • LPC: Ligand-Protein Contacts for 8G0G
  • CSU: Contacts of Structural Units for 8G0G
  • Structure Factors (2646 Kb)
  • Retrieve 8G0G in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 8G0G from S2C, [Save to disk]
  • View 8G0G in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 8G0G
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [8g0g_A] [8g0g_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 8G0G
  • Community annotation for 8G0G at PDBWiki (http://pdbwiki.org)

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