Structure based on 2yev

Ideal structure
Name: (1r,4s,6r)-6-({[2-(acetylamino)-2-deoxy-alpha-d-glucopyranosyl]oxy}methyl)-4-hydroxy-1-{[(15-methylhexadecanoyl)oxy]methyl}-4-oxido-7-oxo-3,5-dioxa-8-aza-4-phosphaheptacos-1-yl 15-methylhexadecanoate
Formula: C67 H129 N2 O15 P
Weight: 1233.719
SMILES: "CCCCCCCCCCCCCCCCCCCNC(=O)[CH](CO[CH]1O[CH](CO)[CH](O)[CH](O)[CH]1NC(C)=O)O[P](O)(=O)OC[CH](COC(=O)CCCCCCCCCCCCCC(C)C)OC(=O)CCCCCCCCCCCCCC(C)C"
Spacial conformation based on PDB 2yev.
Also present on 6sli, 6sm3, 6sml, 6smq
RESIDUE   5PL    214
CONECT      OCO    1 CBL 
CONECT      CBL    3 OCO  CBM  OCL 
CONECT      CBM    4 CBL  CBN  HBM1 HBM2
CONECT      OCL    2 CBL  CBI 
CONECT      CBN    4 CBM  CBO  HBN1 HBN2
CONECT      CBO    4 CBN  CBP  HBO1 HBO2
CONECT      CBP    4 CBO  CAA  HBP1 HBP2
CONECT      CAA    4 CBP  CBR  HAA1 HAA2
CONECT      CBR    4 CAA  CBS  HBR1 HBR2
CONECT      CBS    4 CBR  CBT  HBS1 HBS2
CONECT      CBT    4 CBS  CAL  HBT1 HBT2
CONECT      CAL    4 CBT  CAO  HAL1 HAL2
CONECT      CAO    4 CAL  CAS  HAO1 HAO2
CONECT      CAS    4 CAO  C7   HAS1 HAS2
CONECT      C7     4 CAS  C8   H71C H72C
CONECT      CBI    4 OCL  CBH  HBI1 HBI2
CONECT      CBH    4 CBI  CAW  OCK  HBH 
CONECT      CAW    4 CBH  OCJ  HAW1 HAW2
CONECT      CBV    4 CBW  CBU  HBV1 HBV2
CONECT      CBW    4 CBV  CBX  HBW1 HBW2
CONECT      CBX    4 CBW  CBY  HBX1 HBX2
CONECT      CBY    4 CBX  CBZ  HBY1 HBY2
CONECT      CAE    4 CAF  CBZ  HAE1 HAE2
CONECT      CAF    4 CAE  CAG  HAF1 HAF2
CONECT      CAG    4 CAF  CAK  HAG1 HAG2
CONECT      CAK    4 CAG  CBK  HAK1 HAK2
CONECT      CBK    4 CAK  CBQ  HBK1 HBK2
CONECT      CBQ    4 CBK  C13  HBQ1 HBQ2
CONECT      C13    4 CBQ  C14  H131 H132
CONECT      OCJ    2 CAW  PCR 
CONECT      PCR    4 OCJ  OCI  OCM  OCG 
CONECT      OCI    2 PCR  HCI 
CONECT      OCM    1 PCR 
CONECT      OCG    2 PCR  CAN 
CONECT      CAN    4 OCG  CAM  CAP  HAN 
CONECT      CAM    4 CAN  O1   HAM1 HAM2
CONECT      CBZ    4 CBY  CAE  HBZ1 HBZ2
CONECT      CBU    3 CBV  OCK  OCN 
CONECT      O1     2 CAM  C1  
CONECT      OCK    2 CBH  CBU 
CONECT      C1     4 O1   C2   O5   H1  
CONECT      OCN    1 CBU 
CONECT      C2     4 C1   N2   C3   H2  
CONECT      N2     3 C2   CAQ  HA  
CONECT      CAQ    3 N2   OCP  CAR 
CONECT      OCP    1 CAQ 
CONECT      CAR    4 CAQ  HAR1 HAR2 HAR3
CONECT      C3     4 C2   O3   C4   H3  
CONECT      O3     2 C3   HB  
CONECT      C4     4 C3   O4   C5   H4  
CONECT      O4     2 C4   HC  
CONECT      C5     4 C4   C6   O5   H5  
CONECT      C6     4 C5   O6   H61C H62C
CONECT      O6     2 C6   H6  
CONECT      O5     2 C1   C5  
CONECT      CAP    3 CAN  OCH  NCB 
CONECT      OCH    1 CAP 
CONECT      NCB    3 CAP  CAX  HCB 
CONECT      CAX    4 NCB  CAY  HAX1 HAX2
CONECT      CAY    4 CAX  CAZ  HAY1 HAY2
CONECT      CAZ    4 CAY  CBA  HAZ1 HAZ2
CONECT      CBA    4 CAZ  CBB  HBA1 HBA2
CONECT      CBB    4 CBA  CBC  HBB1 HBB2
CONECT      CBC    4 CBB  CBD  HBC1 HBC2
CONECT      CBD    4 CBC  CBE  HBD1 HBD2
CONECT      CBE    4 CBD  CBF  HBE1 HBE2
CONECT      CBF    4 CBE  CBG  HBF1 HBF2
CONECT      CBG    4 CBF  CAT  HBG1 HBG2
CONECT      CAT    4 CBG  CAU  HAT1 HAT2
CONECT      CAU    4 CAT  CAV  HAU1 HAU2
CONECT      CAV    4 CAU  CBJ  HAV1 HAV2
CONECT      CBJ    4 CAV  C18  HBJ1 HBJ2
CONECT      C8     4 C7   C9   H81C H82C
CONECT      C9     4 C8   C10  C12  H9  
CONECT      C10    4 C9   H101 H102 H103
CONECT      C12    4 C9   H121 H122 H123
CONECT      C14    4 C13  C15  H141 H142
CONECT      C15    4 C14  C16  C17  H15 
CONECT      C16    4 C15  H161 H162 H163
CONECT      C17    4 C15  H171 H172 H173
CONECT      C18    4 CBJ  C19  H181 H182
CONECT      C19    4 C18  C20  H191 H192
CONECT      C20    4 C19  C21  H201 H202
CONECT      C21    4 C20  C22  H211 H212
CONECT      C22    4 C21  H221 H222 H223
CONECT      HBM1   1 CBM 
CONECT      HBM2   1 CBM 
CONECT      HBN1   1 CBN 
CONECT      HBN2   1 CBN 
CONECT      HBI1   1 CBI 
CONECT      HBI2   1 CBI 
CONECT      HBO1   1 CBO 
CONECT      HBO2   1 CBO 
CONECT      HBP1   1 CBP 
CONECT      HBP2   1 CBP 
CONECT      HAA1   1 CAA 
CONECT      HAA2   1 CAA 
CONECT      HBR1   1 CBR 
CONECT      HBR2   1 CBR 
CONECT      HBS1   1 CBS 
CONECT      HBS2   1 CBS 
CONECT      HBT1   1 CBT 
CONECT      HBT2   1 CBT 
CONECT      HAL1   1 CAL 
CONECT      HAL2   1 CAL 
CONECT      HAO1   1 CAO 
CONECT      HAO2   1 CAO 
CONECT      HAS1   1 CAS 
CONECT      HAS2   1 CAS 
CONECT      H71C   1 C7  
CONECT      H72C   1 C7  
CONECT      H81C   1 C8  
CONECT      H82C   1 C8  
CONECT      HBH    1 CBH 
CONECT      HAW1   1 CAW 
CONECT      HAW2   1 CAW 
CONECT      HBV1   1 CBV 
CONECT      HBV2   1 CBV 
CONECT      HBW1   1 CBW 
CONECT      HBW2   1 CBW 
CONECT      HBX1   1 CBX 
CONECT      HBX2   1 CBX 
CONECT      HBY1   1 CBY 
CONECT      HBY2   1 CBY 
CONECT      HBZ1   1 CBZ 
CONECT      HBZ2   1 CBZ 
CONECT      HAE1   1 CAE 
CONECT      HAE2   1 CAE 
CONECT      HAF1   1 CAF 
CONECT      HAF2   1 CAF 
CONECT      HAG1   1 CAG 
CONECT      HAG2   1 CAG 
CONECT      HAK1   1 CAK 
CONECT      HAK2   1 CAK 
CONECT      HBK1   1 CBK 
CONECT      HBK2   1 CBK 
CONECT      HBQ1   1 CBQ 
CONECT      HBQ2   1 CBQ 
CONECT      H131   1 C13 
CONECT      H132   1 C13 
CONECT      H141   1 C14 
CONECT      H142   1 C14 
CONECT      HCI    1 OCI 
CONECT      HAN    1 CAN 
CONECT      HAM1   1 CAM 
CONECT      HAM2   1 CAM 
CONECT      H1     1 C1  
CONECT      H2     1 C2  
CONECT      HA     1 N2  
CONECT      H3     1 C3  
CONECT      HAR1   1 CAR 
CONECT      HAR2   1 CAR 
CONECT      HAR3   1 CAR 
CONECT      HB     1 O3  
CONECT      H4     1 C4  
CONECT      HC     1 O4  
CONECT      H5     1 C5  
CONECT      H61C   1 C6  
CONECT      H62C   1 C6  
CONECT      H6     1 O6  
CONECT      HCB    1 NCB 
CONECT      HAX1   1 CAX 
CONECT      HAX2   1 CAX 
CONECT      HAY1   1 CAY 
CONECT      HAY2   1 CAY 
CONECT      HAZ1   1 CAZ 
CONECT      HAZ2   1 CAZ 
CONECT      HBA1   1 CBA 
CONECT      HBA2   1 CBA 
CONECT      HBB1   1 CBB 
CONECT      HBB2   1 CBB 
CONECT      HBC1   1 CBC 
CONECT      HBC2   1 CBC 
CONECT      HBD1   1 CBD 
CONECT      HBD2   1 CBD 
CONECT      HBE1   1 CBE 
CONECT      HBE2   1 CBE 
CONECT      HBF1   1 CBF 
CONECT      HBF2   1 CBF 
CONECT      HBG1   1 CBG 
CONECT      HBG2   1 CBG 
CONECT      HAT1   1 CAT 
CONECT      HAT2   1 CAT 
CONECT      HAU1   1 CAU 
CONECT      HAU2   1 CAU 
CONECT      HAV1   1 CAV 
CONECT      HAV2   1 CAV 
CONECT      HBJ1   1 CBJ 
CONECT      HBJ2   1 CBJ 
CONECT      H181   1 C18 
CONECT      H182   1 C18 
CONECT      H9     1 C9  
CONECT      H101   1 C10 
CONECT      H102   1 C10 
CONECT      H103   1 C10 
CONECT      H121   1 C12 
CONECT      H122   1 C12 
CONECT      H123   1 C12 
CONECT      H15    1 C15 
CONECT      H161   1 C16 
CONECT      H162   1 C16 
CONECT      H163   1 C16 
CONECT      H171   1 C17 
CONECT      H172   1 C17 
CONECT      H173   1 C17 
CONECT      H191   1 C19 
CONECT      H192   1 C19 
CONECT      H201   1 C20 
CONECT      H202   1 C20 
CONECT      H211   1 C21 
CONECT      H212   1 C21 
CONECT      H221   1 C22 
CONECT      H222   1 C22 
CONECT      H223   1 C22 
END   
HET    5PL            214
HETNAM     5PL (1R,4S,6R)-6-({[2-(ACETYLAMINO)-2-DEOXY-ALPHA-D-GLUCOPY
HETNAM   2 5PL RANOSYL]OXY}METHYL)-4-HYDROXY-1-{[(15-METHYLHEXADECANOY
HETNAM   3 5PL L)OXY]METHYL}-4-OXIDO-7-OXO-3,5-DIOXA-8-AZA-4-PHOSPHAHE
HETNAM   4 5PL PTACOS-1-YL 15-METHYLHEXADECANOATE
FORMUL      5PL    C67 H129 N2 O15 P1

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OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science