Structure based on 3zju |
Ideal structure |
|
| Name: [(1s,5r,6r,8r)-6-(6-aminopurin-9-yl)-2'-(3-oxidanylpropoxy)spiro[2,4,7-trioxa-3-boranuidabicyclo[3.3.0]octane-3,9'-8-oxa-9-boranuidabicyclo[4.3.0]nona-1(6),2,4-triene]-8-yl]methyl dihydrogen phosphate |
| Formula: C20 H24 B N5 O10 P |
| Weight: 536.217 |
| SMILES: "Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(O)=O)[CH]4O[B-]5(OCc6cccc(OCCCO)c56)O[CH]34" |
| Spacial conformation based on PDB
3zju |
RESIDUE DJF 61
CONECT B 4 O1 C12 O2' O3'
CONECT P 4 O5' OP1 OP2 OP3
CONECT N1 2 C2 C6
CONECT O1 2 B C10
CONECT C2 3 N1 N3 H2
CONECT N3 2 C2 C4
CONECT C4 3 N3 C5 N9
CONECT C5 3 C4 C6 N7
CONECT C6 3 N1 C5 N6
CONECT N6 3 C6 HN6 HN6A
CONECT N7 2 C5 C8
CONECT C8 3 N7 N9 H8
CONECT N9 3 C4 C8 C1'
CONECT C1' 4 N9 C2' O4' H1'
CONECT C10 4 O1 C11 H10 H10A
CONECT C11 3 C10 C12 C13
CONECT C12 3 B C11 C16
CONECT C13 3 C11 C14 H13
CONECT C14 3 C13 C15 H14
CONECT C15 3 C14 C16 H15
CONECT C16 3 C12 C15 O17
CONECT O17 2 C16 C18
CONECT C18 4 O17 C19 H18 H18A
CONECT C19 4 C18 C20 H19 H19A
CONECT C2' 4 C1' O2' C3' H2'
CONECT O2' 2 B C2'
CONECT C20 4 C19 O21 H20 H20A
CONECT O21 2 C20 HO21
CONECT C3' 4 C2' O3' C4' H3'
CONECT O3' 2 B C3'
CONECT C4' 4 C3' O4' C5' H4'
CONECT O4' 2 C1' C4'
CONECT C5' 4 C4' O5' H5' H5'A
CONECT O5' 2 P C5'
CONECT OP1 2 P HOP1
CONECT OP2 1 P
CONECT H2 1 C2
CONECT HN6 1 N6
CONECT HN6A 1 N6
CONECT H8 1 C8
CONECT H1' 1 C1'
CONECT H10 1 C10
CONECT H10A 1 C10
CONECT H13 1 C13
CONECT H14 1 C14
CONECT H15 1 C15
CONECT H18 1 C18
CONECT H18A 1 C18
CONECT H19 1 C19
CONECT H19A 1 C19
CONECT H2' 1 C2'
CONECT H20 1 C20
CONECT H20A 1 C20
CONECT HO21 1 O21
CONECT H3' 1 C3'
CONECT H4' 1 C4'
CONECT H5' 1 C5'
CONECT H5'A 1 C5'
CONECT HOP1 1 OP1
CONECT OP3 2 P HOP3
CONECT HOP3 1 OP3
END
HET DJF 61
HETNAM DJF [(1S,5R,6R,8R)-6-(6-aminopurin-9-yl)-2'-(3-oxidanylprop
HETNAM 2 DJF oxy)spiro[2,4,7-trioxa-3-boranuidabicyclo[3.3.0]octane-
HETNAM 3 DJF 3,9'-8-oxa-9-boranuidabicyclo[4.3.0]nona-1(6),2,4-trien
HETNAM 4 DJF e]-8-yl]methyl dihydrogen phosphate
FORMUL DJF C20 H24 B1 N5 O10 P1 1-
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