Hetgroup: EFG

Structure based on 3v6h

Ideal structure

Name: 1-(2-deoxy-2-fluoro-5-o-phosphono-beta-d-arabinofuranosyl)-1h-imidazo[2,1-b]purin-4(5h)-one

Formula: C12 H13 F N5 O7 P

Weight: 389.233

SMILES: "O[CH]1[CH](F)[CH](O[CH]1CO[P](O)(O)=O)n2cnc3C(=O)Nc4nccn4c23"

Spacial conformation based on PDB 3v6h.
Also present on 3v6j, 3v6k, 4fs1, 4fs2

RESIDUE   EFG     39
CONECT      O6     1 C6  
CONECT      C6     3 O6   N1   C5  
CONECT      N1     3 C6   C2   H1  
CONECT      C2     3 N1   N2   N3  
CONECT      N2     2 C2   C10 
CONECT      C10    3 N2   C9   H9  
CONECT      C9     3 C10  N3   H10 
CONECT      N3     3 C2   C9   C4  
CONECT      C4     3 N3   C5   N9  
CONECT      C5     3 C6   C4   N7  
CONECT      N7     2 C5   C8  
CONECT      C8     3 N7   N9   H8  
CONECT      N9     3 C4   C8   C1' 
CONECT      C1'    4 N9   O4'  C2'  H1' 
CONECT      O4'    2 C1'  C4' 
CONECT      C2'    4 C1'  F    C3'  H2' 
CONECT      F      1 C2' 
CONECT      C3'    4 C2'  O3'  C4'  H3' 
CONECT      O3'    2 C3'  HO3'
CONECT      C4'    4 O4'  C3'  C5'  H4' 
CONECT      C5'    4 C4'  O5'  H5'  H5''
CONECT      O5'    2 C5'  P   
CONECT      P      4 O5'  OP1  OP2  OP3 
CONECT      OP1    1 P   
CONECT      OP2    2 P    HOP2
CONECT      H1     1 N1  
CONECT      H9     1 C10 
CONECT      H10    1 C9  
CONECT      H8     1 C8  
CONECT      H1'    1 C1' 
CONECT      H2'    1 C2' 
CONECT      H3'    1 C3' 
CONECT      HO3'   1 O3' 
CONECT      H4'    1 C4' 
CONECT      H5'    1 C5' 
CONECT      H5''   1 C5' 
CONECT      OP3    2 P    HOP3
CONECT      HOP3   1 OP3 
CONECT      HOP2   1 OP2 
END   
HET    EFG             39
HETSYN     EFG 2'-F-N2,3-etheno-2'-deoxyarabinoguanosine
HETNAM     EFG 1-(2-deoxy-2-fluoro-5-O-phosphono-beta-D-arabinofuranos
HETNAM   2 EFG yl)-1H-imidazo[2,1-b]purin-4(5H)-one
FORMUL      EFG    C12 H13 F1 N5 O7 P1

This OCA

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uses Jmol, developed by the Jmol Development Team (color reference)