Structure based on 1lsh

Ideal structure
Name: diundecyl phosphatidyl choline
Formula: C50 H101 N O8 P
Weight: 875.313
SMILES: "CCCCCCCCCCCCCCCCCCCCC(=O)OC[CH](CO[P](O)(=O)OCC[N+](C)(C)C)OC(=O)CCCCCCCCCCCCCCCCCCCC"
Spacial conformation based on PDB 1lsh.
Also present on 8blo
RESIDUE   PLD    161
CONECT      C1     4 C2   O3P  H11  H12 
CONECT      C2     4 C1   C3   O2   H2  
CONECT      C3     4 C2   O3   H31  H32 
CONECT      C4     4 C5   O4P  H41  H42 
CONECT      C5     4 C4   N    H51  H52 
CONECT      C6     4 N    H61  H62  H63 
CONECT      C7     4 N    H71  H72  H73 
CONECT      C8     4 N    H81  H82  H83 
CONECT      C'     3 C1'  O'   O2  
CONECT      C1'    4 C'   C2'  H1'1 H1'2
CONECT      C2'    4 C1'  C3'  H2'1 H2'2
CONECT      C3'    4 C2'  C4'  H3'1 H3'2
CONECT      C4'    4 C3'  C5'  H4'1 H4'2
CONECT      C5'    4 C4'  C6'  H5'1 H5'2
CONECT      C6'    4 C5'  C7'  H6'1 H6'2
CONECT      C7'    4 C6'  C8'  H7'1 H7'2
CONECT      C8'    4 C7'  C9'  H8'1 H8'2
CONECT      C9'    4 C8'  CA'  H9'1 H9'2
CONECT      CA'    4 C9'  CB'  HT'1 HT'2
CONECT      CB'    4 CA'  CC'  HE'1 HE'2
CONECT      CB     3 C1B  OB   O3  
CONECT      C1B    4 CB   C2B  H1A1 H1A2
CONECT      C2B    4 C1B  C3B  H2A1 H2A2
CONECT      C3B    4 C2B  C4B  H3A1 H3A2
CONECT      C4B    4 C3B  C5B  H4A1 H4A2
CONECT      C5B    4 C4B  C6B  H5A1 H5A2
CONECT      C6B    4 C5B  C7B  H6A1 H6A2
CONECT      C7B    4 C6B  C8B  H7A1 H7A2
CONECT      C8B    4 C7B  C9B  H8A1 H8A2
CONECT      C9B    4 C8B  CAA  H9A1 H9A2
CONECT      CAA    4 C9B  CBA  HTA1 HTA2
CONECT      CBA    4 CAA  CCA  HEA1 HEA2
CONECT      O'     1 C'  
CONECT      OB     1 CB  
CONECT      O2     2 C2   C'  
CONECT      O3     2 C3   CB  
CONECT      O1P    1 P   
CONECT      O2P    2 P    HOP2
CONECT      O3P    2 C1   P   
CONECT      O4P    2 C4   P   
CONECT      N      4 C5   C6   C7   C8  
CONECT      P      4 O1P  O2P  O3P  O4P 
CONECT      CC'    4 CB'  CD'  HA'1 HA'2
CONECT      CD'    4 CC'  CE'  HB'1 HB'2
CONECT      CE'    4 CD'  CF'  HC'1 HC'2
CONECT      CF'    4 CE'  CG'  HD'1 HD'2
CONECT      CG'    4 CF'  CH'  HF'1 HF'2
CONECT      CH'    4 CG'  CI'  HG'1 HG'2
CONECT      CI'    4 CH'  CJ'  HH'1 HH'2
CONECT      CJ'    4 CI'  CK'  HI'1 HI'2
CONECT      CK'    4 CJ'  HJ'1 HJ'2 HJ'3
CONECT      CCA    4 CBA  CDA  HAA1 HAA2
CONECT      CDA    4 CCA  CEA  HBA1 HBA2
CONECT      CEA    4 CDA  CFA  HCA1 HCA2
CONECT      CFA    4 CEA  CGA  HDA1 HDA2
CONECT      CGA    4 CFA  CHA  HFA1 HFA2
CONECT      CHA    4 CGA  CIA  HGA1 HGA2
CONECT      CIA    4 CHA  CJA  HHA1 HHA2
CONECT      CJA    4 CIA  CKA  HIA1 HIA2
CONECT      CKA    4 CJA  HJA1 HJA2 HJA3
CONECT      H11    1 C1  
CONECT      H12    1 C1  
CONECT      H2     1 C2  
CONECT      H31    1 C3  
CONECT      H32    1 C3  
CONECT      H41    1 C4  
CONECT      H42    1 C4  
CONECT      H51    1 C5  
CONECT      H52    1 C5  
CONECT      H61    1 C6  
CONECT      H62    1 C6  
CONECT      H63    1 C6  
CONECT      H71    1 C7  
CONECT      H72    1 C7  
CONECT      H73    1 C7  
CONECT      H81    1 C8  
CONECT      H82    1 C8  
CONECT      H83    1 C8  
CONECT      H1'1   1 C1' 
CONECT      H1'2   1 C1' 
CONECT      H2'1   1 C2' 
CONECT      H2'2   1 C2' 
CONECT      H3'1   1 C3' 
CONECT      H3'2   1 C3' 
CONECT      H4'1   1 C4' 
CONECT      H4'2   1 C4' 
CONECT      H5'1   1 C5' 
CONECT      H5'2   1 C5' 
CONECT      H6'1   1 C6' 
CONECT      H6'2   1 C6' 
CONECT      H7'1   1 C7' 
CONECT      H7'2   1 C7' 
CONECT      H8'1   1 C8' 
CONECT      H8'2   1 C8' 
CONECT      H9'1   1 C9' 
CONECT      H9'2   1 C9' 
CONECT      HT'1   1 CA' 
CONECT      HT'2   1 CA' 
CONECT      HE'1   1 CB' 
CONECT      HE'2   1 CB' 
CONECT      H1A1   1 C1B 
CONECT      H1A2   1 C1B 
CONECT      H2A1   1 C2B 
CONECT      H2A2   1 C2B 
CONECT      H3A1   1 C3B 
CONECT      H3A2   1 C3B 
CONECT      H4A1   1 C4B 
CONECT      H4A2   1 C4B 
CONECT      H5A1   1 C5B 
CONECT      H5A2   1 C5B 
CONECT      H6A1   1 C6B 
CONECT      H6A2   1 C6B 
CONECT      H7A1   1 C7B 
CONECT      H7A2   1 C7B 
CONECT      H8A1   1 C8B 
CONECT      H8A2   1 C8B 
CONECT      H9A1   1 C9B 
CONECT      H9A2   1 C9B 
CONECT      HTA1   1 CAA 
CONECT      HTA2   1 CAA 
CONECT      HEA1   1 CBA 
CONECT      HEA2   1 CBA 
CONECT      HOP2   1 O2P 
CONECT      HA'1   1 CC' 
CONECT      HA'2   1 CC' 
CONECT      HB'1   1 CD' 
CONECT      HB'2   1 CD' 
CONECT      HC'1   1 CE' 
CONECT      HC'2   1 CE' 
CONECT      HD'1   1 CF' 
CONECT      HD'2   1 CF' 
CONECT      HF'1   1 CG' 
CONECT      HF'2   1 CG' 
CONECT      HG'1   1 CH' 
CONECT      HG'2   1 CH' 
CONECT      HH'1   1 CI' 
CONECT      HH'2   1 CI' 
CONECT      HI'1   1 CJ' 
CONECT      HI'2   1 CJ' 
CONECT      HJ'1   1 CK' 
CONECT      HJ'2   1 CK' 
CONECT      HJ'3   1 CK' 
CONECT      HAA1   1 CCA 
CONECT      HAA2   1 CCA 
CONECT      HBA1   1 CDA 
CONECT      HBA2   1 CDA 
CONECT      HCA1   1 CEA 
CONECT      HCA2   1 CEA 
CONECT      HDA1   1 CFA 
CONECT      HDA2   1 CFA 
CONECT      HFA1   1 CGA 
CONECT      HFA2   1 CGA 
CONECT      HGA1   1 CHA 
CONECT      HGA2   1 CHA 
CONECT      HHA1   1 CIA 
CONECT      HHA2   1 CIA 
CONECT      HIA1   1 CJA 
CONECT      HIA2   1 CJA 
CONECT      HJA1   1 CKA 
CONECT      HJA2   1 CKA 
CONECT      HJA3   1 CKA 
END   
HET    PLD            161
HETNAM     PLD di-heneicosanoyl phosphatidyl choline
FORMUL      PLD    C50 H101 N1 O8 P1 1+

This OCA MONOMER page
uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science