Structure based on 1efr

Ideal structure
Name: n1-(2-amino-4-methylpentyl)octahydro-pyrrolo[1,2-a] pyrimidine
Formula: C13 H27 N3
Weight: 225.374
SMILES: "CC(C)C[CH](N)CN1CCCN2CCC[CH]12"
Spacial conformation based on PDB 1efr
RESIDUE   TLX     43
CONECT      N1     3 C2   C9   C1' 
CONECT      C2     4 N1   C3   H21  H22 
CONECT      C3     4 C2   C4   H31  H32 
CONECT      C4     4 C3   N5   H41  H42 
CONECT      N5     3 C4   C6   C9  
CONECT      C6     4 N5   C7   H61  H62 
CONECT      C7     4 C6   C8   H71  H72 
CONECT      C8     4 C7   C9   H81  H82 
CONECT      C9     4 N1   N5   C8   H9  
CONECT      C1'    4 N1   C2'  H1'1 H1'2
CONECT      C2'    4 C1'  C3'  N'   H2' 
CONECT      C3'    4 C2'  C4'  H3'1 H3'2
CONECT      C4'    4 C3'  C5'  CM'  H4' 
CONECT      C5'    4 C4'  H5'1 H5'2 H5'3
CONECT      CM'    4 C4'  HM'1 HM'2 HM'3
CONECT      N'     3 C2'  HN'1 HN'2
CONECT      H21    1 C2  
CONECT      H22    1 C2  
CONECT      H31    1 C3  
CONECT      H32    1 C3  
CONECT      H41    1 C4  
CONECT      H42    1 C4  
CONECT      H61    1 C6  
CONECT      H62    1 C6  
CONECT      H71    1 C7  
CONECT      H72    1 C7  
CONECT      H81    1 C8  
CONECT      H82    1 C8  
CONECT      H9     1 C9  
CONECT      H1'1   1 C1' 
CONECT      H1'2   1 C1' 
CONECT      H2'    1 C2' 
CONECT      H3'1   1 C3' 
CONECT      H3'2   1 C3' 
CONECT      H4'    1 C4' 
CONECT      H5'1   1 C5' 
CONECT      H5'2   1 C5' 
CONECT      H5'3   1 C5' 
CONECT      HM'1   1 CM' 
CONECT      HM'2   1 CM' 
CONECT      HM'3   1 CM' 
CONECT      HN'1   1 N'  
CONECT      HN'2   1 N'  
END   
HET    TLX             43
HETNAM     TLX N1-(2-AMINO-4-METHYLPENTYL)OCTAHYDRO-PYRROLO[1,2-A] PYR
HETNAM   2 TLX IMIDINE
FORMUL      TLX    C13 H27 N3

This OCA MONOMER page
uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science