Structure based on 4u7c | Ideal structure |
|
Name: 2'-deoxy-n-[(7r,8s,9r,10s)-7,8,9-trihydroxy-7,8,9,10-tetrahydrobenzo[pqr]tetraphen-10-yl]guanosine 5'-(dihydrogen phosphate) |
Formula: C30 H28 N5 O10 P |
Weight: 649.545 |
SMILES: "O[CH]1C[CH](O[CH]1CO[P](O)(O)=O)n2cnc3C(=O)NC(=Nc23)N[CH]4[CH](O)[CH](O)[CH](O)c5cc6ccc7cccc8ccc(c45)c6c78" |
Spacial conformation based on PDB
4u7c. Also present on 5t14 |
RESIDUE VKJ 74
CONECT O1 1 C1
CONECT C1 3 O1 N1 C4
CONECT N1 3 C1 C2 H1
CONECT C2 3 N1 N2 N3
CONECT N2 3 C2 C12 H2
CONECT N3 2 C2 C3
CONECT C3 3 N3 C4 N5
CONECT C4 3 C1 C3 N4
CONECT N4 2 C4 C5
CONECT C5 3 N4 N5 H3
CONECT N5 3 C3 C5 C6
CONECT C6 4 N5 O2 C7 H4
CONECT O2 2 C6 C9
CONECT C7 4 C6 C8 H5 H6
CONECT C8 4 C7 O3 C9 H7
CONECT O3 2 C8 H8
CONECT C9 4 O2 C8 C10 H9
CONECT C10 4 C9 O4 H10 H11
CONECT O4 2 C10 P1
CONECT P1 4 O4 O5 O6 O3P
CONECT O5 1 P1
CONECT O6 2 P1 H13
CONECT O7 2 C11 H14
CONECT C11 4 O7 C12 C14 H15
CONECT C12 4 N2 C11 C13 H16
CONECT C13 3 C12 C16 C20
CONECT C14 4 C11 O8 C15 H17
CONECT O8 2 C14 H18
CONECT C15 4 C14 O9 C16 H19
CONECT O9 2 C15 H20
CONECT C16 3 C13 C15 C17
CONECT C17 3 C16 C18 H21
CONECT C18 3 C17 C19 C26
CONECT C19 3 C18 C20 C23
CONECT C20 3 C13 C19 C21
CONECT C21 3 C20 C22 H22
CONECT C22 3 C21 C28 H23
CONECT C23 3 C19 C24 C28
CONECT C24 3 C23 C25 C27
CONECT C25 3 C24 C26 H24
CONECT C26 3 C18 C25 H25
CONECT C27 3 C24 C30 H26
CONECT C28 3 C22 C23 C29
CONECT C29 3 C28 C30 H27
CONECT C30 3 C27 C29 H28
CONECT H1 1 N1
CONECT H2 1 N2
CONECT H3 1 C5
CONECT H4 1 C6
CONECT H5 1 C7
CONECT H6 1 C7
CONECT H7 1 C8
CONECT H8 1 O3
CONECT H9 1 C9
CONECT H10 1 C10
CONECT H11 1 C10
CONECT H13 1 O6
CONECT H14 1 O7
CONECT H15 1 C11
CONECT H16 1 C12
CONECT H17 1 C14
CONECT H18 1 O8
CONECT H19 1 C15
CONECT H20 1 O9
CONECT H21 1 C17
CONECT H22 1 C21
CONECT H23 1 C22
CONECT H24 1 C25
CONECT H25 1 C26
CONECT H26 1 C27
CONECT H27 1 C29
CONECT H28 1 C30
CONECT O3P 2 P1 H12
CONECT H12 1 O3P
END
HET VKJ 74
HETNAM VKJ 2'-deoxy-N-[(7R,8S,9R,10S)-7,8,9-trihydroxy-7,8,9,10-te
HETNAM 2 VKJ trahydrobenzo[pqr]tetraphen-10-yl]guanosine 5'-(dihydro
HETNAM 3 VKJ gen phosphate)
FORMUL VKJ C30 H28 N5 O10 P1