| Title | Oragnism | User Friendly | Comments |
|---|---|---|---|
| open in new windowArrayExpress | GP | 5 | |
| open in new windowGEO | GP | 5 | Set for entire organism can be download |
| open in new windowExpressDB | E.coli; S. cerevisiae | 2 | |
| open in new windowGXD | M. musculus | 3 | Expression data from other assay but microarray |
| open in new windowCAGEr | download application | 4 | Analysis of CAGE (Cap Analysis of Gene Expression) |
| open in new windowRAD | GP | 5 | SAGE |
| open in new windowBioGPS | GP | Normal and cancer tissues | |
| Gene Expression Atlas1 | H. Sapiens M. musculus |
5 | Normal and cancer tissues |
| open in new windowMouse Gene Expression Atlas | M. musculus | SAGE Normal and cancer tissues | |
| open in new windowHuGE Index | H. Sapiens | 4 | Normal and cancer tissues |
| open in new windowGene Expression Atlases at PLEXdb | Plants | Expression data | |
| ROAD | Rice | Oligonucleotide Array Database | |
| open in new windowRicePLEX | Rice | Expression data |