1NV7 Hydrolase date Feb 02, 2003
title Fructose-1,6-Bisphosphatase Complex With Amp, Magnesium, Fru Phosphate, Phosphate And Thallium (20 Mm)
authors J.Choe, C.V.Iancu, H.J.Fromm, R.B.Honzatko
compound source
Molecule: Fructose-1,6-Bisphosphatase
Chain: A, B
Ec: 3.1.3.11
Engineered: Yes
Organism_scientific: Sus Scrofa
Organism_common: Pig
Organism_taxid: 9823
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 2
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
59.950 166.150 79.290 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.15 Å
ligand AMP, F6P, MG, PO4, TL enzyme Hydrolase E.C.3.1.3.11 BRENDA
related structures by homologous chain: 1FPD, 1LEV
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceInteraction of Tl+ with product complexes of fructose-1,6-bisphosphatase., Choe JY, Nelson SW, Fromm HJ, Honzatko RB, J Biol Chem 2003 May 2;278(18):16008-14. PMID:12595529
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (117 Kb) [Save to disk]
  • Biological Unit Coordinates (1nv7.pdb1.gz) 111 Kb
  • Biological Unit Coordinates (1nv7.pdb2.gz) 218 Kb
  • LPC: Ligand-Protein Contacts for 1NV7
  • CSU: Contacts of Structural Units for 1NV7
  • Likely Quarternary Molecular Structure file(s) for 1NV7
  • Structure Factors (340 Kb)
  • Retrieve 1NV7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1NV7 from S2C, [Save to disk]
  • Re-refined 1nv7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1NV7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1NV7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1NV7, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1nv7a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1nv7b_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1nv7_B] [1nv7] [1nv7_A]
  • SWISS-PROT database: [P00636]
  • Domain organization of [F16P1_PIG] by SWISSPFAM
  • Other resources with information on 1NV7
  • Community annotation for 1NV7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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