SNPs Databases

SNPs related databases list

HapMap project - a haplotype map of the human genome, to describe the common patterns of human DNA sequence variation

dbSNPO at NCBI

JSNP - A database of Japanese Single Nucleotide Polymorphisms

HGVbase - Human Genome Variation database

IIPGA to discover and model the associations between nucleotide sequence variations, primarily Single Nucleotide Polymorphisms (SNPs) and Insertion/Deletion polymorphisms (Indels), in the human genes

HGVS - Human Genome Variation Society

PolyPhen: prediction of functional effect of human nsSNPs

SIFT predicts whether an amino acid substitution affects protein function based on sequence homology

PolyDoms: Mapping of Human Coding SNPs onto Protein Domains

SNP Research at Washinton university (software and databases)

SNP databases and tools