This is a collection of useful software, web servers and databases for prediction of proteins structure and proteins structure-based features.
2-D Structure Prediction
- Predictions platforms
- Protein disorder prediction
- Domain prediction
- Secondary structure prediction
- Coiled-coil prediction
- Local structure prediction
- Cysteines disulfide bonding prediction
- Contact map prediction
- Metal binding site prediction
- Membrane protein and signal peptide prediction
3-D Structure Prediction
- Template-base modeling
- Hybrid methods combining template-based and ab initio methods
- Loop prediction
Macromolecular Simulation
Binding Site Prediction and Docking
The tools marked by were designed and developed at the Weizmann Institute of Science.